[AMBER] water in enzyme active site

From: Shirin Jamshidi <shirinjamshid.yahoo.com>
Date: Mon, 19 Dec 2011 09:10:24 -0800 (PST)

Dear Mam/Sir

How could I consider just the water molecules within the distance of 1 angstrom around the ligand.
Is the below commands correct?

donor mask :ligandname <:1.0 & :WAT.O
acceptor mask :ligandname <:1.0 & :WAT.O :WAT.H1
acceptor mask :ligandname <:1.0 & :WAT.O :WAT.H2


Shirin Jamshidi
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Received on Mon Dec 19 2011 - 09:30:04 PST
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