[AMBER] installation problem of amber9 in ubuntu 10.04

From: Madhurima Jana <tinni.217.gmail.com>
Date: Sat, 17 Dec 2011 15:39:42 +0530

Hi all,

During installation of AMBER9 in ubuntu 10.04, I am getting following

~/Downloads/amber9/src$ make serial

Starting installation of Amber9 (serial) at Sat Dec 17 15:28:29 IST 2011.
cd lib; make install
make[1]: Entering directory `/home/Downloads/amber9/src/lib'
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond new2oldparm.f
> _new2oldparm.f
gfortran -c -O0 -fno-second-underscore -o new2oldparm.o _new2oldparm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond nxtsec.f >
gfortran -c -O0 -fno-second-underscore -o nxtsec.o _nxtsec.f
gfortran -o new2oldparm new2oldparm.o nxtsec.o
mv new2oldparm ../../exe
/bin/rm _*.f
make[1]: Leaving directory `/home/madhurima/Downloads/amber9/src/lib'
cd addles; make install
make[1]: Entering directory `/home/madhurima/Downloads/amber9/src/addles'
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond lesmain.f >
gfortran -c -O0 -fno-second-underscore -o lesmain.o _lesmain.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond addspace.f >
gfortran -c -O0 -fno-second-underscore -o addspace.o _addspace.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond readprm.f >
gfortran -c -O0 -fno-second-underscore -o readprm.o _readprm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond writprm.f >
gfortran -c -O0 -fno-second-underscore -o writprm.o _writprm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond readcrd.f >
gfortran -c -O0 -fno-second-underscore -o readcrd.o _readcrd.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond writcrd.f >
gfortran -c -O0 -fno-second-underscore -o writcrd.o _writcrd.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond pick.f >
gfortran -c -O0 -fno-second-underscore -o pick.o _pick.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond rline.f >
gfortran -c -O0 -fno-second-underscore -o rline.o _rline.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond nxt.f > _nxt.f
gfortran -c -O0 -fno-second-underscore -o nxt.o _nxt.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond intgr.f >
gfortran -c -O0 -fno-second-underscore -o intgr.o _intgr.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond find.f >
gfortran -c -O0 -fno-second-underscore -o find.o _find.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond of.f > _of.f
gfortran -c -O0 -fno-second-underscore -o of.o _of.f

     1 1x,'*** IF EXISTS MUST SPECIFY read OR wovr ',/)
Warning: Extension: Tab character in format at (1)
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond geti.f >
gfortran -c -O0 -fno-second-underscore -o geti.o _geti.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond unit.f >
gfortran -c -O0 -fno-second-underscore -o unit.o _unit.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond getc.f >
gfortran -c -O0 -fno-second-underscore -o getc.o _getc.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond alert.f >
gfortran -c -O0 -fno-second-underscore -o alert.o _alert.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond echo.f >
gfortran -c -O0 -fno-second-underscore -o echo.o _echo.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond get4c.f >
gfortran -c -O0 -fno-second-underscore -o get4c.o _get4c.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond getd.f >
gfortran -c -O0 -fno-second-underscore -o getd.o _getd.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond wlesprm.f >
gfortran -c -O0 -fno-second-underscore -o wlesprm.o _wlesprm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond lesprm.f >
gfortran -c -O0 -fno-second-underscore -o lesprm.o _lesprm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond les2prm.f >
gfortran -c -O0 -fno-second-underscore -o les2prm.o _les2prm.f
cpp -traditional -P -xassembler-with-cpp -Dsecond=ambsecond checksz.f >
gfortran -c -O0 -fno-second-underscore -o checksz.o _checksz.f
cd ../lib; ./Makelist ../lib/random.o ../lib/mexit.o ../lib/nxtsec.o
/bin/sh: ./Makelist: not found
make[1]: *** [libobj] Error 127
make[1]: Leaving directory `/home/Downloads/amber9/src/addles'
make: *** [serial] Error 2

Could anyone please suggest how to recover it. I used ./configure -verbose
gfortran to build config.h file.

Thanks in advance,
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Received on Sat Dec 17 2011 - 02:30:03 PST
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