Re: [AMBER] Measuring the distance in Amber 11

From: Daniel Roe <daniel.r.roe.gmail.com>
Date: Fri, 16 Dec 2011 09:52:49 -0500

Hi,

Atom masks in ptraj have residue and atom lists separate, so instead of:

> distance dist_73-84_139-150 :73.CA-84.CA :139.CA-150.CA out distance.dat

try:

distance dist_73-84_139-150 :73-84.CA :139-150.CA out distance.dat

-Dan

-- 
-------------------------
Daniel R. Roe, PhD
Postdoctoral Associate
BioMaPS Institute, Rutgers University
610 Taylor Road
Piscataway, NJ   08854
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Received on Fri Dec 16 2011 - 07:00:02 PST