Dear All
Thank you for your advice.
I have compiled Amber successfully.
I had not recompiled AmberTool after bug fix.
Best Regards, Yukio
-----Original Message-----
From: Daniel Roe [mailto:daniel.r.roe.gmail.com]
Sent: Friday, December 09, 2011 12:36 PM
To: AMBER Mailing List
Subject: Re: [AMBER] Amber11 compile
Hi,
Before attempting to compile Amber11, did you run patch_amber.py from
$AMBERHOME after you compiled AmberTools 1.5?
-Dan
On Fri, Dec 9, 2011 at 5:55 AM, yukio <kaneda.surf.chem.es.osaka-u.ac.jp>
wrote:
> Dear all amber developers and users
>
>
>
> I am Yukio, studying at Osaka Univ.
>
> I am writing to ask you to how to install Amber11.
>
>
>
> I have installed Ambertool 1.5 and tried to install Amber 11 by following
a
> manual, but it would not work.
>
> I have set AMBERHOME and patched Ambertool.
>
> Then, going to $AMBERHOME/src, I typed make serial.
>
> Part of the error messages is this.
>
>
>
> ______________________________________________________________________
>
>>
>
>> cd sander && make serial
>
>> make[1]: Entering directory
>
>> `/homes/ykaneda/Desktop/AMBER11/amber11/src/sander'
>
>> cpp -traditional constants.f > _constants.f gfortran -c -O3 -o
>
>> constants.o _constants.f In file constants.f:24
>
>>
>
>> module constants
>
>> 1
>
>> Error: Non-numeric character in statement label at (1) In file
>
>> constants.f:24 module constants
>
>> 1
>
>> Error: Unclassifiable statement at (1)
>
>> In file constants.f:28
>
>> double precision, parameter :: TEN_TO_MINUS2 = 1.0d-2
>
>> 1
>
>> Error: Non-numeric character in statement label at (1)
>
>> In file constants.f:28
>
>> double precision, parameter :: TEN_TO_MINUS2 = 1.0d-2
>
>> 1
>
>> Error: Unclassifiable statement at (1)
>
>> In file constants.f:29
>
>> double precision, parameter :: TEN_TO_MINUS3 = 1.0d-3
>
>> 1
>
>> Error: Non-numeric character in statement label at (1)
>
>> In file constants.f:29
>
>> double precision, parameter :: TEN_TO_MINUS3 = 1.0d-3
>
>> 1
>
>> Error: Unclassifiable statement at (1)
>
>> In file constants.f:30
>
>>
>
>> ______________________________________________________________________
>
>
>
> Please let me know how to complete compiling.
>
>
>
> Thank you very much and I look forward to hearing from you.
>
>
>
> Regards, Yukio
>
>
>
>
============================================================================
> -
>
> Yukio Kaneda
>
> Fukui lab.
>
> Department of Materials Engineering Science, Graduate School of
Engineering
> Science, Osaka University, Japan Email : kaneda.surf.chem.es.osaka-u.ac.jp
>
>
============================================================================
>
>
>
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
--
-------------------------
Daniel R. Roe, PhD
Postdoctoral Associate
BioMaPS Institute, Rutgers University
610 Taylor Road
Piscataway, NJ 08854
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Fri Dec 09 2011 - 07:00:02 PST
