Re: [AMBER] How to repair defect RNA residues?

From: Crystal.CHIA-YU Ku <crystal.chia.yu.gmail.com>
Date: Fri, 2 Dec 2011 14:25:34 -0800

Dear Dr. Case,

I appreciate your information that suggests to check the REMARK line
containg the version of PDB name scheme first.

Sincerely,

Crystal

On Thu, Nov 24, 2011 at 11:05 AM, case <case.biomaps.rutgers.edu> wrote:

> On Wed, Nov 23, 2011, Crystal.CHIA-YU Ku wrote:
> >
> > Thank you for your important reminding. Could you let me know when pdb
> > changed their naming scheme?
>
> I'm not sure this matters. All current PDB files at RCSB use the version 3
> naming scheme. If you get your pdb file from some other source, just look
> at
> it to see what naming scheme is used. "Real" pdb files will have a REMARK
> line containing "COMPLIES WITH FORMAT V. 3.15" or similar, but pdb programs
> written by other codes may or may not be so identified.
>
> ....dac
>
>
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Received on Fri Dec 02 2011 - 14:30:04 PST
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