Re: [AMBER] How to repair defect RNA residues?

From: case <case.biomaps.rutgers.edu>
Date: Thu, 24 Nov 2011 14:05:59 -0500

On Wed, Nov 23, 2011, Crystal.CHIA-YU Ku wrote:
>
> Thank you for your important reminding. Could you let me know when pdb
> changed their naming scheme?

I'm not sure this matters. All current PDB files at RCSB use the version 3
naming scheme. If you get your pdb file from some other source, just look at
it to see what naming scheme is used. "Real" pdb files will have a REMARK
line containing "COMPLIES WITH FORMAT V. 3.15" or similar, but pdb programs
written by other codes may or may not be so identified.

....dac


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Received on Thu Nov 24 2011 - 11:30:02 PST
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