Re: [AMBER] compilation of Amber Tools 1.5 with GCC 4.6.2 with "-nopython"

From: Tyler Luchko <tluchko.rci.rutgers.edu>
Date: Tue, 22 Nov 2011 16:07:00 -0500

On 11/22/2011 03:55 PM, Vlad Cojocaru wrote:
> Dear ambers,
>
> I open a new thread because the next compilation errors (Amber Tools 1.5
> patched with latest bugfixes downloaded yesterday) are not related to
> the ones described in my previous attempts.
> I configured now with "-nopython" ...
>
> The next thing I had to do was to cp all libraries stored in
> $AMBERHOME/AmberTools/lib64 and $AMBERHOME/lib64 to $AMBERHOME/lib ...
> The lib64 dirs are apparently not searched for during the compilation
> phase although the libraries are stored there after configure.
>
> After copying these libs, I am still getting errors ... And this time,
> errors that I cannot understand. Attached is a full log file of make
> install.
>
> As a reminder:
> Architecture: x86_64, AMD CPUs
> OS: openSUSE 12.1
> Compiler: GCC 4.6.2
>
> Any ideas how to fix these new problem would be appreciated. Is the new
> GCC source of all these problems ?

 From the errors in your logfile it appears that you were using parallel
make (e.g. make -j 4). Unfortunately the makefiles for AmberTools only
support serial make at this time.

Tyler

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Received on Tue Nov 22 2011 - 13:30:02 PST
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