Dear AMBER users,
I am currently trying to make a hydrogen bond RST file for a 9-mer RNA duplex. When I try and run makeDIST_RST i obtain the following error:
# makeDIST_RST
Currently configured for up to 5000 atoms
Using MAP file /share/apps/amber11/dat/map.DG-AMBER
ERROR no map function for H1 RG5 :data= 1 GUA H1 18 CYT N3 1.84 2.04
The first couple lines of my 8col.wc input file are:
1 GUA H1 18 CYT N3 1.84 2.04
1 GUA H22 18 CYT O2 1.75 1.95
1 GUA N1 18 CYT N3 2.85 3.05
1 GUA O6 18 CYT H42 1.80 2.00
1 GUA O6 18 CYT N4 2.81 3.01
Any help on this problem would be greatly appreciated.
Thanks,
Charlie
--
Charles A. Johnson
Graduate Student
Department of Chemistry
Saint Louis University
Monsanto Hall 214
3501 Laclede Ave.
St. Louis, MO 63103-2010
Fax: (314) 977-2521
Email: cjohns98.slu.edu
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Received on Tue Nov 22 2011 - 09:00:03 PST
