On Sat, Nov 12, 2011, leila karami wrote:
>
> I installed amber 10 as parallel. when I run amber tutorial A6 ( mpirun -np
> 2 $AMBERHOME/exe/sander.MPI -ng 2 -groupfile model_step1.group),
>
> -----------------------------------------------------------------------------
>
> It seems that there is no lamd running on the host localhost.localdomain.
>
> This indicates that the LAM/MPI runtime environment is not operating.
> The LAM/MPI runtime environment is necessary for MPI programs to run
> (the MPI program tired to invoke the "MPI_Init" function).
>
> Please run the "lamboot" command the start the LAM/MPI runtime
> environment. See the LAM/MPI documentation for how to invoke
> "lamboot" across multiple machines.
> -----------------------------------------------------------------------------
> -----------------------------------------------------------------------------
>
> how can I resolve that.
Seems like a pretty straightforward error message: this is a problem with LAM
(not amber), and you need to run the lamboot command first.
....dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Nov 12 2011 - 08:30:03 PST
