Re: [AMBER] Periodic Box in igb mode

From: David A Case <case.biomaps.rutgers.edu>
Date: Mon, 31 Oct 2011 08:25:21 -0400

On Sun, Oct 30, 2011, Davood Norouzi wrote:
>
> I am using Amber10 and I would like to
> simulate an RNA with discrete ions around it in implicit solvent. I don't
> know how to create the periodic box with implicit solvent. I need the box
> to confine the surrounding ions.

Amber does not support the sort of calculation you describe.

...dac


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Received on Mon Oct 31 2011 - 05:30:08 PDT
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