Hi,
What version of the gnu compilers are you using? Have you applied all
of the bugfixes?
http://ambermd.org/bugfixesat.html
I think this issue was corrected with bugfix 8.
-Dan
On Sat, Oct 29, 2011 at 1:42 PM, James Starlight <jmsstarlight.gmail.com> wrote:
> Dear Amber, users!
>
> I have problems with compilation of the latest version of the Amber tools
> under Debuan Linux
>
> I've used ./configure gnu
>
> and after make install I've obtained
>
> ake[1]: Entering directory `/home/own/Documents/amber11/AmberTools/src/pbsa'
> cpp -traditional -P -DBINTRAJ amg1r5.f > _amg1r5.f
> gfortran -c -O3 -mtune=generic -msse -mfpmath=sse -ffree-form -o amg1r5.o
> _amg1r5.f
> _amg1r5.f:1204.16:
>
> ifg,a(jtrst),time,ndjtr,ium,mdjtr)
> 1
> Warning: Type mismatch in argument 'jtr' at (1); passed REAL(8) to
> INTEGER(4)
> _amg1r5.f:1217.58:
>
> call pcol(k-1,ierr,ia,ja,iw,imin,imax,imaxw,icg,ifg,u(irst), &
> 1
> Warning: Type mismatch in argument 'ir' at (1); passed REAL(8) to INTEGER(4)
> _amg1r5.f:1224.26:
>
> imaxw,ifg,icg,u(irst),time,ierr,irow0,ncolx, &
> 1
> Warning: Type mismatch in argument 'ncolor' at (1); passed REAL(8) to
> INTEGER(4)
> _amg1r5.f:1232.16:
>
> ifg,u(irst),nstcol,ncolx,time,nda,ndja,ium, &
> 1
> Warning: Type mismatch in argument 'ncolor' at (1); passed REAL(8) to
> INTEGER(4)
> _amg1r5.f:3461.23:
>
> external idec,random
> 1
> Error: Return type mismatch of function 'random' at (1) (REAL(8)/REAL(4))
> _amg1r5.f:3029.45:
>
> ja(jlo),a(jlo),f(ilo),u(ilo),nsp,a(jhi+1),a(jhi+1), &
> 1
> Warning: Type mismatch in argument 'isp' at (1); passed REAL(8) to
> INTEGER(4)
> _amg1r5.f:3095.45:
>
> ja(jlo),a(jlo),f(ilo),u(ilo),nsp,a(jhi+1),a(jhi+1), &
> 1
> Warning: Type mismatch in argument 'isp' at (1); passed REAL(8) to
> INTEGER(4)
> _amg1r5.f:3619.17:
>
> external cgalf,cgeps,ctime
> 1
> Error: Return type mismatch of function 'cgalf' at (1) (REAL(8)/REAL(4))
> _amg1r5.f:3619.23:
>
> external cgalf,cgeps,ctime
> 1
> Error: Return type mismatch of function 'cgeps' at (1) (REAL(8)/REAL(4))
> make[1]: *** [amg1r5.o] Error 1
> make[1]: Leaving directory `/home/own/Documents/amber11/AmberTools/src/pbsa'
> make: *** [serial] Error 2
>
> How I can solve that problem?
>
> Thank you
>
> James
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
--
-------------------------
Daniel R. Roe, PhD
Postdoctoral Associate
BioMaPS Institute, Rutgers University
610 Taylor Road
Piscataway, NJ 08854
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sat Oct 29 2011 - 13:30:03 PDT
