Souvik,
SO far as I know Curves+ can read trajectories. See:
http://gbio-pbil.ibcp.fr/Curves_plus/Using_Curves+.html
Rami
On Oct 28, 2011, at 2:19 AM, souvik sur wrote:
Dear all,
I have been using Amber to do MD simulations of PNA-DNA duplex containing modified base in PNA-strand. I know that this listserv is not for Curves, but I figure a fair number of people must use it. I want to use Curves in the analysis of my
simulations and have noticed that it will only accept a snapshot, not
an average structure. Does anyone now suggest me how to use Curves with the help of Amber trajectories ?
I am waiting for your reply.
Thanks & Regards,
Souvik Sur
Ph. D. Student
Department Of Chemistry
University Of Delhi
India
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Roman Osman
Department of Structural and Chemical Biology
Mount Sinai School of Medicine
New York, NY 10029
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Fax: 212-849-2456
e-mail: roman.osman.mssm.edu<mailto:roman.osman.mssm.edu>
http://atlas.physbio.mssm.edu/~osmanlab
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Received on Fri Oct 28 2011 - 07:30:02 PDT
