Hi,
Currently the hbond routine does not use imaging. Ideally you would
use the center and imaging commands to reorient your molecules of
interest so that imaging is not a factor prior to using the hbond
command. Can you please post a little more information about your
system and how you tried to re-image it?
-Dan
On Thu, Oct 27, 2011 at 4:27 AM, mirage . <m.o.m.live.fr> wrote:
>
>
> Hi Amber users,
>
> i am using different option to reimag my molecules but in some case a part of one molecule is out box ? How to do a correct hbound analysis in this caseThanks
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--
-------------------------
Daniel R. Roe, PhD
Postdoctoral Associate
BioMaPS Institute, Rutgers University
610 Taylor Road
Piscataway, NJ 08854
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Received on Thu Oct 27 2011 - 07:30:02 PDT
