Re: [AMBER] quasi-harmonic analysis

From: Collu, Francesca (DCB) <"Collu,>
Date: Wed, 26 Oct 2011 08:56:03 +0000

Hello!

I had the same problem and I discovered that my system is too big and my computer does not have
enough memory for such big system.

Now I am doing the calculation considering just CA atoms and not all the atoms.

regards

Francesca
________________________________________
Von: Neha Gandhi [n.gandhiau.gmail.com]
Gesendet: Mittwoch, 26. Oktober 2011 10:50
Bis: AMBER Mailing List
Betreff: [AMBER] quasi-harmonic analysis

HI,

I am using AMBER 11 and Ambertools 1.5. I am trying to run entropy
calculations using quasi-harmonic appoximation. I get similar errors as
reported earlier (http://archive.ambermd.org/201108/0152.html). The entropy
is zero. I couldn't find any errors in output files. Unfortunately, I cannot
attach input files here due to their size.

Awaiting your positive reply,

Regards,
Neha Gandhi
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber

_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Oct 26 2011 - 02:00:03 PDT
Custom Search