acpype may indeed be the tool to use here, altough I haven't tried myself
either.
I do know the following works:
- convert mdcrd to dcd in ptraj (where you can also strip solvent etc.)
- convert the dcd to xtc in WORDOM
Marc
On 15 Oct 2011 15:43, "Oliver Grant" <olivercgrant.gmail.com> wrote:
> acpype currently does this but I've never used it myself. Check the website
> for which versions of gromacs it supports. There are also some other
> scripts
> but I think this one is still live and being developed so should be up to
> date.
> Oliver
>
> On 15 October 2011 11:52, mish <smncbr.gmail.com> wrote:
>
> > Hello all:
> >
> > Can any one direct me to a way of converting Amber trajectories to
> Gromacs
> > XTC file format. I need to do some dihedral PCA in gromacs.
> >
> > /mish
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> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
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Received on Sat Oct 15 2011 - 10:30:04 PDT
