I'm using Ubuntu, with the bash shell.
-Matt
On Wed, Oct 12, 2011 at 3:17 PM, Carlos Sosa <sosa0006.r.umn.edu> wrote:
> What Linux shell are using?
>
> On Wed, Oct 12, 2011 at 2:06 PM, Matthew D Antalek
> <mantale1.binghamton.edu>wrote:
>
> > Hi,
> >
> > I'm an undergrad, and I've never done an MD simulation before, nor have
> I
> > worked much in Linux. I am having some problems with the installation of
> > Amber 11 on my computer. I successfully unpacked the Amber11 and
> AmberTools
> > packages into an amber11 directory. I then follow the instructions
> outlined
> > in the Amber 11 manual (section 1.3), but nothing is happening. I'm using
> > the bash shell so as outlined in the manual I type:
> >
> > set AMBERHOME=/matt/Amber/amber11
> >
> > but I don't see any output from this command. Likewise, when I type
> >
> > export AMBERHOME
> >
> > nothing happens. It seems that I am not creating a $AMBERHOME directory,
> > because when I type in a command such as
> >
> > cd $AMBERHOME/src
> >
> > I get an error saying "No such file or directory".
> >
> > I also think that I correctly edited the system's PATH to include the
> > $AMBERHOME/bin directory but I'm not sure.
> >
> >
> > Any help would be much appreciated.
> >
> > Sincerely,
> > Matt
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Carlos P Sosa, Ph.D.
> Adjunct Assistant Professor
> *Biomedical Informatics and Computational Biology* (BICB)
> University of Minnesota Rochester
> 300 University Square<
> http://www1.umn.edu/twincities/maps/UniversitySquare/>
> R0869A
> 111 S Broadway
> Rochester, MN 55904
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Oct 12 2011 - 12:30:05 PDT
