Hi,
I'm an undergrad, and I've never done an MD simulation before, nor have I
worked much in Linux. I am having some problems with the installation of
Amber 11 on my computer. I successfully unpacked the Amber11 and AmberTools
packages into an amber11 directory. I then follow the instructions outlined
in the Amber 11 manual (section 1.3), but nothing is happening. I'm using
the bash shell so as outlined in the manual I type:
set AMBERHOME=/matt/Amber/amber11
but I don't see any output from this command. Likewise, when I type
export AMBERHOME
nothing happens. It seems that I am not creating a $AMBERHOME directory,
because when I type in a command such as
cd $AMBERHOME/src
I get an error saying "No such file or directory".
I also think that I correctly edited the system's PATH to include the
$AMBERHOME/bin directory but I'm not sure.
Any help would be much appreciated.
Sincerely,
Matt
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Received on Wed Oct 12 2011 - 12:30:02 PDT
