Dear Amber users and developers,
Thank you for usual support.
I am now using pmemd.parallel of amber11.
but suffered from sudden abortion of jobs.
The following error messages appeared.
[mpiexec.rcc101]HYDU_sock_read (./utils/sock/sock.c:223): read errno
(Input/output error)
[mpiexec.rcc101] control_cb (./pm/pmiserv/pmiserv_cb.c:249): assert
(!closed) failed
[mpiexec.rcc101] HYDT_dmxu_poll_wait_for_event
(./tools/demux/demux_poll.c:77): callback returned error status
[mpiexec.rcc101] HYD_pmci_wait_for_completion
(./pm/pmiserv/pmiserv_pmci.c:206): error waiting for event
[mpiexec.rcc101] main (./ui/mpich/mpiexec.c:404): process manager error
waiting for completion
Although all tests for parallel compiling were passed,
Pmemd.mpi jobs was frequently aborted.
I am most grateful if you give some advices to resolve this problem.
Yours sincerely,
Ikuo Kurisaki
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Sep 28 2011 - 00:30:02 PDT
