[AMBER] Chromophore Building

From: Yao Yao <yao0o.ymail.com>
Date: Tue, 27 Sep 2011 12:34:19 -0700 (PDT)

Hi,

I am going to build a structure file for Green Fluorescent Protein (GFP) chromophore from scratch and run simulation in Amber.
Since its structure is not embedded in Amber ff, I was wondering if xLeap can do it or I need to refer to other software.
Anyone has any experience in constructing this kind of molecules?
Thanks,

Yao Yao
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Sep 27 2011 - 13:00:03 PDT
Custom Search