Dear All,
I could successfully compile ambertools (serial), amber (serial)
and amber (parallel) using the intel compilers (11.0) and intel
mpi (3.2.2) on a cluster Debian Squeeze based.
The compilation of ambertools (parallel) runs smoothly until it
reaches nab.c:
### ERROR MESSAGE ###
make[1]: Leaving directory
`/share/lcbc/software/amber-11-intel/AmberTools/src/pbsa'
(cd nab && make parallel )
make[1]: Entering directory
`/share/lcbc/software/amber-11-intel/AmberTools/src/nab'
mpicc -DBINDIR='"/software/amber-11-intel/bin"' \
-DINCDIR='"/software/amber-11-intel/include"' \
-DLIBDIR='"/software/amber-11-intel/lib"' \
-DCC='"mpicc"' -DCPP='"/software/amber-11-intel/bin/ucpp -l"'
-DFLIBS='"-L/software/amber-11-intel/lib -lsff_mpi -lpbsa
/software/amber-11-intel/lib/arpack.a
/software/amber-11-intel/lib/lapack.a
/software/amber-11-intel/lib/blas.a
/software/amber-11-intel/lib/libnetcdf.a
-L/software/intel/Compiler/11.0/084/lib/intel64/ -lifport -lifcore
-lsvml "' \
-D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DBINTRAJ -DMPI \
-shared-intel -o /software/amber-11-intel/bin/mpinab nab.c
nab.c(159): error: missing closing quote
CPP, cppstring, INCDIR,
^
nab.c(261): error: missing closing quote
sprintf( word, " %s ", FLIBS );
^
compilation aborted for nab.c (code 2)
### END ERROR MESSAGE ###
Any advise about this error message?
PS: using the intel compilers 11.1 insead of 11.0 I cannot even
compile the serial version of ambertools... I get very similar
error messages which I'm not reporting here.
Thanks,
--matt
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Received on Thu Sep 22 2011 - 18:00:03 PDT
