Re: [AMBER] Water density/potential visualization

From: Daniel Sindhikara <sindhikara.gmail.com>
Date: Fri, 9 Sep 2011 14:16:49 +0900

The easiest thing that comes to mind is converting it to .dx format.
http://www.cs.wpi.edu/research/DataExplorer/tutorial/data.html
.dx files are readable by many visualization programs.


On Fri, Sep 9, 2011 at 1:56 AM, Abhishek Mukhopadhyay <abmukho.vt.edu>wrote:

> Hi,
>
> I have a question which is probably not suitable for this group. But
> any insight into this is of great help. I have a file containing x y z
> and \rho(x,y,z) i.e. the electron density for water molecule. The
> x,y,z are the coordinates in a cubical mesh with 81X81X81 small cubes.
> Is there a way to visualize the electron density cloud/potential in
> 3D?
>
> Thanks,
> A.M.
>
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-- 
Dr. Daniel J. Sindhikara
Institute for Molecular Science
E-mail: sindhikara.gmail.com
Website: http://sites.google.com/site/dansindhikara/
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Received on Fri Sep 09 2011 - 00:30:02 PDT
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