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-- Jason M. Swails Quantum Theory Project, University of Florida Ph.D. Candidate 352-392-4032 On Aug 19, 2011, at 10:54 AM, "Jennifer L. Muzyka" <jennifer.muzyka.centre.edu> wrote: > When I type echo $AMBERHOME, I get /Users/jennifer.muzyka/opt/amber11. I have downloaded the script and the patch tarball both to the same amber11 directory. > Jennifer > > > On Aug 19, 2011, at 10:51 AM, David A Case wrote: > >> On Fri, Aug 19, 2011, Jennifer L. Muzyka wrote: >> >>> I'm trying to install the Amber 11 bugfixes before installing >>> Amber 11. When I try to apply the bugfix patch as described >>> at ambermd.org/bugfixes11.html (using ./apply_bugfix.x >>> bugfix.1to17.tar.bz2), I get the following error: >>> tar: Error opening archive: Failed to open 'bugfix.1to17.tar.bz2': No >>> such file or directory >> >> I'm guessing this arises because your AMBERHOME environment variable is not >> set correctly. It should point to the amber11 tree. Can you see if that is >> the problem? >> >> ...dac >> >> >> _______________________________________________ >> AMBER mailing list >> AMBER.ambermd.org >> http://lists.ambermd.org/mailman/listinfo/amber > > Jennifer L. Muzyka > Professor of Chemistry > Centre College > 600 West Walnut Street > Danville, KY 40422 > > jennifer.muzyka.centre.edu > http://web.centre.edu/muzyka/ > > > > > _______________________________________________ > AMBER mailing list > AMBER.ambermd.org > http://lists.ambermd.org/mailman/listinfo/amber _______________________________________________ AMBER mailing list AMBER.ambermd.org http://lists.ambermd.org/mailman/listinfo/amberReceived on Fri Aug 19 2011 - 08:30:03 PDT