Re: [AMBER] AmberTools installation difficulties on Mac OSX

From: Jason Swails <jason.swails.gmail.com>
Date: Wed, 17 Aug 2011 18:00:26 -0400

You can configure with -nopython and it should work fine.

Also, to select your python version, use "port select" the same way you do
with gcc:

port select python python2.7

HTH,
Jason

On Wed, Aug 17, 2011 at 4:33 PM, Jennifer L. Muzyka <
jennifer.muzyka.centre.edu> wrote:

> I'm trying to install AmberTools 1.5 on a Mac running OSX 10.6.8 with
> MacPorts gcc44 (selected using port select). I've been referring to the
> instructions at amberonmac.blogspot.com. I can get it to work if I use
> the -nopython flag ("./configure -macAccelerate -nopython gnu). Otherwise I
> get strange errors that seem related to python. In response to "which
> python", I get opt/local/bin/python, which doesn't seem to correspond to the
> python27 that I installed using MacPorts. I can't figure out how to force
> the system to use the python2.7. Or maybe I don't need to, and will be okay
> with mmpbsa.py installed separately? If so, should I run AT_Amber11.py
> before installing Amber 11? I don't get a message with the instructions to
> do that when AmberTools finishes. I have trouble installing Amber 11 either
> way, unfortunately. I can't help but wonder if the problem is related to
> the python version being used. I would appreciate any information you can
> provide. Thanks.
> Jennifer
>
>
>
> Jennifer L. Muzyka
> Professor of Chemistry
> Centre College
> 600 West Walnut Street
> Danville, KY 40422
>
> jennifer.muzyka.centre.edu
> http://web.centre.edu/muzyka/
>
>
>
>
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> http://lists.ambermd.org/mailman/listinfo/amber
>



-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Wed Aug 17 2011 - 15:30:02 PDT
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