Re: [AMBER] Inpcrd file problem

From: Bill Ross <ross.cgl.ucsf.EDU>
Date: Thu, 11 Aug 2011 11:15:26 -0700

> I used TIP3PBOX

What solvate *cmd* did you use? There are > 1.

> I do not see any BOX INFO. Here is the end of the inpcrd file:

Looks like no box. In inpcrd btw it just shows as crds and angles
at the end, with no label.

Bill

[dcantu.lightningsmp julie_prob]$ tail acds.inpcrd
  14.8590000 11.6010000 11.1070000 13.1510000 12.8680000 7.9920000
  12.6910000 13.6200000 7.6180000 12.5220000 12.1490000 7.9330000
   3.5810000 11.1770000 7.1670000 4.0970000 10.5660000 6.6420000
   4.2310000 11.6800000 7.6580000 6.3200000 12.0680000 7.9940000
   6.6080000 11.8130000 7.1170000 6.8330000 11.5160000 8.5840000
   6.3880000 12.9900000 15.3600000 7.3140000 12.7540000 15.4040000
   6.3730000 13.8170000 14.8790000 14.6220000 12.5320000 2.3580000
  14.7970000 11.8460000 1.7140000 13.9240000 13.0570000 1.9660000
  12.9550000 12.2170000 15.1850000 13.7480000 11.7210000 14.9770000
  13.2490000 12.8960000 15.7920000


Thanks,

David


On Thu, Aug 11, 2011 at 12:30 PM, Bill Ross <ross.cgl.ucsf.edu> wrote:

> > I made the inpcrd on Xleap, after solvating a protein.
>
> What solvate cmd did you use? Do you see box info if you 'tail inpcrd'?
>
> Bill
>

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Received on Thu Aug 11 2011 - 11:30:04 PDT
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