I am currently working through the AMBER tutorials for NMR refinement of a DNA duplex. However, I am using RNA and came across this statement: If you were working with RNA instead of DNA, you would want to source $AMBERHOME/dat/leap/cmd/leaprc.rna instead of the default $AMBERHOME/dat/leap/cmd/leaprc (which assumes the nucleic acid residues are DNA). I am not sure how or where to implement this change. Any help would be appreciated.
Thanks,
Charlie
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Charles A. Johnson
Graduate Student
Department of Chemistry
Saint Louis University
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Received on Thu Aug 11 2011 - 10:30:03 PDT
