I'm trying to follow the instructions for compiling parallel Amber11 [I have the serial version already] from Amber11.pdf, page 11. Openpmi is now up to version 1.4.3 from 1.4.1 in the manual & the config_openmpi file, so I saved a copy of the original & changed the version number. mpicc & mpig90 are in /usr/local/bin, & my .bashrc reflects that. which & whereis locate mpicc & mpig90 in the terminal session I'm using for the attempted make. Nonetheless, when I try ./configure_openmpi gnu, the response stubbornly remains:
Setting AMBERHOME to /usr/amber11/AmberTools
You must download openmpi and extract it here
(for example, type 'tar xvfj openmpi-1.4.3.tar.bz2')
See
http://www.open-mpi.org/software/ompi/v1.4/ for more info;
Then, re-run this script.
I have a 4-processor Dell Workstation running Centos5.6. Can anyone suggest what I might be doing wrong?
Thanks!
Irene Newhouse
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Received on Wed Aug 10 2011 - 20:30:04 PDT
