[AMBER] How to extract selected residues from mdcrd to PDB file using ptraj?

From: Catein Catherine <askamber23.hotmail.com>
Date: Thu, 11 Aug 2011 10:55:16 +0800

Dear Sir/Madam,
I would like to extract selected residues from a trajectory to a series of PDB file.
How can I do it using ptraj? What is the command to extract selected residue (122-300, 440-500) to a PDB file
trajin ../xxx.mdcrd.gztrajout PDBfit/xxx.pdb pdb nobox nowrapstrip :WATstrip :Na+
Best regards,
Catherine
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Received on Wed Aug 10 2011 - 20:00:02 PDT
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