Dear Amber Users,
As a continuation of my previous email, I also tried to check the charges after
removing the prep files from ZAFF library (Ambertools 1.5) and using Zn2+ and
CYS instad of modified unit of negetively charged CYS (CY1) for Zn-CCCC. For
this modified structure, the total charge is +4 units. However, when I use prep
information from ZAFF library in Ambertools1.5, the charge of the protein
becomes +1.23.
It would be very helpful if you can please comment on this.
Thanks a lot.
Best Regards,
Moitrayee
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Received on Fri Jul 22 2011 - 06:30:02 PDT
