Re: [AMBER] RNA duplex

From: Raman Parkesh <rparkesh.gmail.com>
Date: Tue, 28 Jun 2011 20:50:51 -0400

Hi Charlie,

You might try this server for making RNA starting structure.
http://structure.usc.edu/make-na/

Raman





On 28 June 2011 20:33, Charles Johnson <cjohns98.slu.edu> wrote:

> I am new to AMBER so forgive me if this topic has already been covered. I
> am working with a short piece of RNA that has a single mismatch in it. I am
> wanting to use nab to build my starting structure; however, I am unable to
> find a tutorial to build such an RNA motif. Any help/guidance would be
> appreciated.
>
> Thanks,
> Charlie
>
> --
> Charles A. Johnson
> Graduate Student
> Department of Chemistry
> Saint Louis University
>
>
>
>
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Received on Tue Jun 28 2011 - 18:00:04 PDT
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