Re: [AMBER] How to prepare ATP with Antechamber?

From: Takeshi Baba <tbaba.cheng.es.osaka-u.ac.jp>
Date: Tue, 21 Jun 2011 18:05:03 +0900

> Hi All,
> Does anybody have experience of preparing ATP structure by
> Antechamber?
> I tried to use mol2 file generated as by MOE as by Schrodinger, but
> never
> had luck to solve this question.
>

You should check http://www.pharmacy.manchester.ac.uk/bryce/amber
There is amber parameter of ATP.

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   Takeshi Baba

  Graduate School of Life Science, University of Hyogo,
  3-2-1 Koto, Kamigori, Akoh-gun, Hyogo 678-1297, Japan
  E-mail: tbaba.cheng.es.osaka-u.ac.jp
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Received on Tue Jun 21 2011 - 02:30:03 PDT
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