There's no need to use tleap from amber9 when you can install AmberTools 1.5
(in which this bug is fixed) for free.
HTH,
Jason
On Tue, Jun 7, 2011 at 4:54 AM, TH Chew <teonghan.gmail.com> wrote:
> Hi,
>
> I posted the same problem yesterday and Jason replied. It is most likely a
> bug related to 64bit OS. This morning, I manage to get it compile with test
> running fine on a 32bit OS. Can you post what you have in test/ff94_prm.out
> here?
>
> Thanks.
>
> On Tue, Jun 7, 2011 at 6:44 PM, souvik sur <souviksur.hotmail.com> wrote:
>
> >
> > Dear sir,
> >
> > Here is the following error in test of "leap"
> >
> >
> >
> > [root.nis test]# make test.leap
> > cd leap; ./Run.tleap
> >
> > Running leap tests on ./tleap -> ../../exe/teLeap
> >
> > building force field libraries:
> >
> > '91 ff..
> >
> > diffing ../../dat/leap/lib/all_amino91.lib with all_amino91.lib
> > PASSED
> > ==============================================================
> > diffing ../../dat/leap/lib/all_aminoct91.lib with all_aminoct91.lib
> > PASSED
> > hello sir,
> >
> > Here is the following error :
> >
> > ==============================================================
> > diffing ../../dat/leap/lib/all_aminont91.lib with all_aminont91.lib
> > PASSED
> > ==============================================================
> > diffing ../../dat/leap/lib/all_nucleic91.lib with all_nucleic91.lib
> > PASSED
> > ==============================================================
> > diffing ../../dat/leap/lib/ions91.lib with ions91.lib
> > PASSED
> > ==============================================================
> >
> > '94 ff..
> >
> > diffing ../../dat/leap/lib/all_amino94.lib with all_amino94.lib
> > PASSED
> > ==============================================================
> > diffing ../../dat/leap/lib/all_aminoct94.lib with all_aminoct94.lib
> > PASSED
> > ==============================================================
> > diffing ../../dat/leap/lib/all_aminont94.lib with all_aminont94.lib
> > PASSED
> > ==============================================================
> > diffing ../../dat/leap/lib/all_nucleic94.lib with all_nucleic94.lib
> > PASSED
> > ==============================================================
> > diffing ../../dat/leap/lib/ions94.lib with ions94.lib
> > PASSED
> > ==============================================================
> >
> > loadpdb and saveamberparm: 94 ff..
> >
> > ./Run.tleap: Program error in leap
> > make: *** [test.leap] Error 1
> >
> >
> >
> > regards,
> > Souvik Sur
> > Ph. D. Student
> > Department Of Chemistry
> > University Of Delhi
> > India
> >
> >
> >
> >
> > > Date: Tue, 7 Jun 2011 18:11:23 +0800
> > > From: teonghan.gmail.com
> > > To: amber.ambermd.org
> > > Subject: Re: [AMBER] Loadin AMBER9 in linux
> > >
> > > Hi Souvik,
> > >
> > > I actually come across this yesterday. Did you compile in a 64bit Linux
> > OS?
> > >
> > > Thanks.
> > >
> > > On Tue, Jun 7, 2011 at 6:08 PM, souvik sur <souviksur.hotmail.com>
> > wrote:
> > >
> > > >
> > > >
> > > > sir,
> > > >
> > > > Just now i have installed amber9 in linux but when i run make
> > > > "test.serial",there showed an error in loading "leap":
> > > > loadpdb and saveamberparm: 94 ff..
> > > >
> > > > ./Run.tleap: Program error in leap
> > > > make: *** [test.leap] Error 1
> > > >
> > > >
> > > > what can I do for it?
> > > >
> > > > regards,
> > > > Souvik Sur
> > > > Ph. D. Student
> > > > Department Of Chemistry
> > > > University Of Delhi
> > > > India
> > > >
> > > >
> > > >
> > > > _______________________________________________
> > > > AMBER mailing list
> > > > AMBER.ambermd.org
> > > > http://lists.ambermd.org/mailman/listinfo/amber
> > > >
> > >
> > >
> > >
> > > --
> > > Regards,
> > > THChew
> > > _______________________________________________
> > > AMBER mailing list
> > > AMBER.ambermd.org
> > > http://lists.ambermd.org/mailman/listinfo/amber
> >
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
>
>
>
> --
> Regards,
> THChew
> _______________________________________________
> AMBER mailing list
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Tue Jun 07 2011 - 08:30:03 PDT
