Per-residue decomposition with MMPBSA.py requires an Amber11 sander or
later. A good deal of the MMPBSA.py functionality in AmberTools 1.5 is
accessible *only* with AmberTools, but a couple things require Amber11.
Namely, you need Amber for per-residue and pairwise-residue decomposition
analysis as well as QM/MMGBSA analyses.
Hope this helps,
Jason
On Thu, Jun 2, 2011 at 11:42 AM, David A Case <case.biomaps.rutgers.edu>wrote:
> On Thu, Jun 02, 2011, Siavoush Dastmalchi wrote:
> >
> > But was wondering if there was any issue with not installing Amber11.
>
> AmberTools should work fine with or without Amber11. Just depends on what
> functionality you want.
>
> ...dac
>
>
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>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Thu Jun 02 2011 - 09:30:03 PDT
