[AMBER] simulation of small molecule with organic solvent and water

From: Senthil Natesan <sen.natesan.yahoo.com>
Date: Thu, 2 Jun 2011 08:03:35 -0700 (PDT)

Hello Amber Users/Developers,

Greetings. I want to run MD simulation of diacetyl phosphocholine along with 4
acetic acid molecules in explicit water.
I did run MD simulation without acetic acid successfully. Can anyone point me
to any older posts ( I am not able to find any relevant posts).
or tutorials (or papers) to accomplish the above task?

thanks in advance,

Senthil Natesan
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Received on Thu Jun 02 2011 - 08:30:04 PDT
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