Re: [AMBER] NMR restraints file format

From: David A Case <case.biomaps.rutgers.edu>
Date: Wed, 1 Jun 2011 07:53:32 -0400

On Wed, Jun 01, 2011, tong Zhu wrote:
>
> I had download a NMR Restraints file from PDB website (1i6c.mr), but I can
> not understand the format of it.

> !# 8
> assign (atom "WW" 3 HB2 )(atom "WW" 6 HE1 ) 4.0 2.0 2.3

I'm pretty sure this is xplor format. You can Google on "convert xplor NMR to
amber" to get some pointers about converting these to Amber format. Also
check the BMRB (BioMagResBank): I think Jurgen Doreleijers may have some
scripts that would help as well.

....dac


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Received on Wed Jun 01 2011 - 05:00:05 PDT
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