Re: [AMBER] MMPBSA nmode warning

From: Bill Miller III <brmilleriii.gmail.com>
Date: Sat, 28 May 2011 07:59:21 -0400

My guess is since you got this warning message that you did not get any
entropic results with your calculation, is that correct? In that case, you
will need to fix this problem in order to get your final results.

-Bill

On Sat, May 28, 2011 at 5:41 AM, Sangita Kachhap <sangita.imtech.res.in>wrote:

>
> Hello All
>
> I am doing MMPBSA nmode analysis. Job has completed successfully but with a
> warning.
>
> WARNINGS:
> Not all of your snapshots minimized within tolerable limits for nmode
>
> Will it affect my final result?
>
> With regard
>
> Sangita Kachhap
> JRF
> BIC,IMTECH
> CHANDIGARH
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>



-- 
Bill Miller III
Quantum Theory Project,
University of Florida
Ph.D. Graduate Student
352-392-6715
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Received on Sat May 28 2011 - 05:00:03 PDT
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