Re: [AMBER] Test results for amber-cuda, single node, single GPU, Tesla C2070

From: Jason Swails <jason.swails.gmail.com>
Date: Wed, 25 May 2011 18:35:34 -0400

On Wed, May 25, 2011 at 5:43 PM, Ross Walker <ross.rosswalker.co.uk> wrote:

> > The parallel and serial CPU versions compile just fine. The GPU
> > installation
> > directions are also out of sync, ie, it refers to "cuda_parallel"
> > target,
> > whereas the distributed makefile does not contain such a target.
>
> Yes it does. Line 45 of $AMBERHOME/src/Makefile
>
> cuda_parallel: configured_cuda configured_parallel clean $(NETCDFLIB)
> .echo "Starting installation of ${AMBER} (cuda parallel) at `date`".
> cd pmemd && $(MAKE) cuda_parallel
>
> Something smells fishy with your copy of AMBER 11 to me if it is missing
> this.
>

Could be unpatched. I don't think we had cuda_parallel at Amber11 release,
right?


>
> All the best
> Ross
>
> /\
> \/
> |\oss Walker
>
> ---------------------------------------------------------
> | Assistant Research Professor |
> | San Diego Supercomputer Center |
> | Adjunct Assistant Professor |
> | Dept. of Chemistry and Biochemistry |
> | University of California San Diego |
> | NVIDIA Fellow |
> | http://www.rosswalker.co.uk | http://www.wmd-lab.org/ |
> | Tel: +1 858 822 0854 | EMail:- ross.rosswalker.co.uk |
> ---------------------------------------------------------
>
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-- 
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Wed May 25 2011 - 16:00:03 PDT
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