[AMBER] set UNIT box

From: George Tzotzos <gtzotzos.me.com>
Date: Mon, 09 May 2011 20:00:13 +0200

Hi everybody,

I'm dealing with a modified trajectory file (have stripped HOHs from the original file). I need to generate a new topology file for my complex.

I load my complex in tleap

> COMPLEX = my_complex.pdb

Then I try to set a unit box using the box dimensions taken from the modified trajectory file (last line).

I do a

> set COMPLEX box 67.602 60.679 66.072

and get

set: Improper number of arguments!
usage: set <container> <parameter> <object>
  or: set default <parameter> <value>


I'd appreciate your suggestions on the correct syntax for setting the unit box.

Many thanks in advance

George

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Received on Mon May 09 2011 - 11:30:02 PDT
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