[AMBER] End of protonate method with amber11?

From: Guenegou, Guillaume [ORDFR] <GGUENEGO.ITS.JNJ.com>
Date: Tue, 26 Apr 2011 13:54:38 +0200

Hi everybody,

I have to switch from amber8 to amber11. I have a script which was using
the "protonate" method of amber8.

$AMBHOME/protonate <$input >$output in a shell file

I saw this method is enabled in amber10, but I cannot find anything
about its replacement or its disappearing in amber11.

The question is simple, how can I replace the use of the "protonate"
method in using amber11?

Sorry if I missed a previous post or any explanations in the FAQ or in
the archives.

 

G. GUENEGOU

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Received on Tue Apr 26 2011 - 05:00:03 PDT
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