thank you sir....can you tell me in which chapter I can find "defining a molecule" in tutorial?and also please tell me how to deselect something and undo of my work in xleap window.
regards,
Souvik Sur
Ph. D. Student
Department Of Chemistry
University Of Delhi
India
> Date: Mon, 25 Apr 2011 22:46:50 -0700
> From: ross.cgl.ucsf.EDU
> To: amber.ambermd.org
> Subject: Re: [AMBER] Xleap problem
>
> > how to zoom the structure in xleap
>
> Try holding a mouse button down and moving the mouse up, not
> sure if that does it.
>
> > and there shows no bonds in between atoms in my drug molecule,
>
> This means you need to read a tutorial on defining a new molecule.
> Once you have a template created for it, bonds will show automatically.
> In the short run you can use bondbydistance for the drug, if that is
> loaded as a separate pdb.
>
> Bill
>
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Received on Tue Apr 26 2011 - 01:00:03 PDT
