Re: [AMBER] Does AMBER 9 has parameters for ions F- Br- I- etc

From: David A Case <case.biomaps.rutgers.edu>
Date: Thu, 14 Apr 2011 08:11:50 -0400

On Thu, Apr 14, 2011, MD wrote:

> Does AMBER 11 has parameters for F- Br- I-?
> I saw the ions94.lib in AMBER 9. There are only 'ClO, Cl-, Cs+, IB, K+, ... Rb+'

Please see the ions08.lib file, and be sure to read the section on "ions" in
the AmberTools Users' Manual (section 2.9). Note that the ion parameters
depend upon which water model you are using, and that you must manually load
the appropriate frcmod file.

....dac


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Received on Thu Apr 14 2011 - 05:30:02 PDT
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