Oh sorry, its also the same, 4.4.3
Majid
________________________________
From: Jason Swails <jason.swails.gmail.com>
To: AMBER Mailing List <amber.ambermd.org>
Sent: Sun, April 10, 2011 1:49:23 PM
Subject: Re: [AMBER] Error in installing Amber Tools
What about gfortran?
On Sun, Apr 10, 2011 at 1:41 PM, majid hasan <pu_majidhasan.yahoo.com>wrote:
> cpp: (Ubuntu 4.4.3-4ubuntu5) 4.4.3,
> and same for g++, and gcc. I installed them from ubuntu software center.
>
> I have also attached the complete config.log file. Any ideas?
>
> Thanks for your help,
> Majid
>
>
>
>
> ________________________________
> From: Jason Swails <jason.swails.gmail.com>
> To: AMBER Mailing List <amber.ambermd.org>
> Sent: Sun, April 10, 2011 12:55:53 PM
> Subject: Re: [AMBER] Error in installing Amber Tools
>
> The configure.log says that cpp sanity check didn't work.
>
> It's impossible to tell what's going wrong based on the information we
> have. Make sure you follow the installation instructions found in the
> manual as closely as possible. Also note that there may be permission
> issues with installing in /usr/local (see previous posts on the list).
>
> What version is your cpp, gcc, g++, and gfortran? You can find this with
> the --version flag for each one.
>
> On Sun, Apr 10, 2011 at 12:40 PM, majid hasan <pu_majidhasan.yahoo.com
> >wrote:
>
> > Dear All,
> >
> > I am getting following error when I run make (more output attached)
> >
> > " gunzip -c -d ../reduce_wwPDB_het_dict.txt.gz >
> > /home/majid/down/amber11/dat/reduce_wwPDB_het_dict.txt
> > /bin/sh: cannot create
> > /home/majid/down/amber11/dat/reduce_wwPDB_het_dict.txt:
> > Directory nonexistent
> > make[2]: *** [install] Error 2
> > make[2]: Leaving directory
> > `/home/majid/down/amber11/AmberTools/src/reduce/reduce_src'
> > make[1]: *** [install] Error 2
> > make[1]: Leaving directory `/home/majid/down/amber11/AmberTools/src/ '
> > make: *** [serial] Error 2
> > ubuntu:~/down/amber11/AmberTools/src> "
> >
> > ./configure gnu went well except this error:
> >
> > Configuring NetCDF; (may be time consuming)
> > NetCDF configure returned 1
> > NetCDF configure failed! Ceck the netcdf_config.log file. Continuing but
> > NetCDF
> > will be skipped.
> >
> >
> > netcdf_config.log file is attached.
> > _______________________________________________
> > AMBER mailing list
> > AMBER.ambermd.org
> > http://lists.ambermd.org/mailman/listinfo/amber
> >
> >
>
>
> --
> Jason M. Swails
> Quantum Theory Project,
> University of Florida
> Ph.D. Candidate
> 352-392-4032
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
> _______________________________________________
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> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Sun Apr 10 2011 - 14:00:04 PDT
