The configure.log says that cpp sanity check didn't work.
It's impossible to tell what's going wrong based on the information we
have. Make sure you follow the installation instructions found in the
manual as closely as possible. Also note that there may be permission
issues with installing in /usr/local (see previous posts on the list).
What version is your cpp, gcc, g++, and gfortran? You can find this with
the --version flag for each one.
On Sun, Apr 10, 2011 at 12:40 PM, majid hasan <pu_majidhasan.yahoo.com>wrote:
> Dear All,
>
> I am getting following error when I run make (more output attached)
>
> " gunzip -c -d ../reduce_wwPDB_het_dict.txt.gz >
> /home/majid/down/amber11/dat/reduce_wwPDB_het_dict.txt
> /bin/sh: cannot create
> /home/majid/down/amber11/dat/reduce_wwPDB_het_dict.txt:
> Directory nonexistent
> make[2]: *** [install] Error 2
> make[2]: Leaving directory
> `/home/majid/down/amber11/AmberTools/src/reduce/reduce_src'
> make[1]: *** [install] Error 2
> make[1]: Leaving directory `/home/majid/down/amber11/AmberTools/src/ '
> make: *** [serial] Error 2
> ubuntu:~/down/amber11/AmberTools/src> "
>
> ./configure gnu went well except this error:
>
> Configuring NetCDF; (may be time consuming)
> NetCDF configure returned 1
> NetCDF configure failed! Ceck the netcdf_config.log file. Continuing but
> NetCDF
> will be skipped.
>
>
> netcdf_config.log file is attached.
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
>
--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Sun Apr 10 2011 - 13:00:04 PDT
