On Sun, Apr 10, 2011 at 11:30 AM, majid hasan <pu_majidhasan.yahoo.com>wrote:
> Dear All,
>
> I am new to AmberTools, and Linux. I want to create a single strand dna for
> dna-cnt simulation in gromacs. I earlier configures AmberTools, but I
> didn't
> include $AMBERHOME/bin in my path, so it didn't correctly. Can anyone
> please
> tell me how uninstall AmberTools, to make a clean installation?
>
AmberTools/Amber are entirely self-contained in its own directory. Just
removing the directory and extracting the files again is sufficient.
AmberTools will install properly without putting $AMBERHOME/bin in your
PATH, it just may not install correctly if you don't set AMBERHOME at all
(or set it to something incorrect).
>
> And if I just overwrite the earlier installation by configuring again, will
> it
> work?
>
Yes it should. Make sure you run a "make clean" first, though.
Good luck,
Jason
>
> Thank You,
> Majid
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--
Jason M. Swails
Quantum Theory Project,
University of Florida
Ph.D. Candidate
352-392-4032
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Received on Sun Apr 10 2011 - 12:00:04 PDT
