Dear all,
I am using amber10 on SUSE 11.3 operating system. When i am calculating
mm_pbsa using mm_pbsa.pl, it is showing error like " *No radius found for
Br8 6180 in residue*" . Here, Br8 is bromine atom whose atom no is 6180 in
pdb. However, i can successfully calculate mm_pbsa for other ligands without
Bromine.
Can anyone suggest me to get rid of this issue? I will be grateful for every
help. I am attaching my log file.
Thanks in advance
--
**************************************************************************************************************************
Kshatresh Dutta Dubey
Senior Research Fellow (SRF)
Biophysics Unit,
Department of Physics
DDU Gorakhpur University
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
- application/octet-stream attachment: log2
Received on Thu Apr 07 2011 - 01:00:04 PDT
