[AMBER] The following error i got at the end of MM_PBSA.pl

From: vani panguluri <vanipanguluri.gmail.com>
Date: Wed, 6 Apr 2011 06:18:21 -0500

hello,

Use of uninitialized value in concatenation (.) or string at
/usr/local/packages/amber/11/intel-11.1-mvapich-1.1/src/mm_pbsa/
mm_pbsa_createinput.pm line 596.
Use of uninitialized value in concatenation (.) or string at
/usr/local/packages/amber/11/intel-11.1-mvapich-1.1/src/mm_pbsa/
mm_pbsa_createinput.pm line 596.
Use of uninitialized value in concatenation (.) or string at
/usr/local/packages/amber/11/intel-11.1-mvapich-1.1/src/mm_pbsa/
mm_pbsa_createinput.pm line 596.
        Prmtop ./pdb1k4u_apo2.prmtop and coord.file ./snapshot_com.crd.1
have different atom numbers
        For details see:
http://ambermd.org/Questions/mm_pbsa.html#check_atom_nr_prmtop_and_crd_differat
/usr/local/packages/amber/11/intel-11.1-mvapich-1.1/src/mm_pbsa/
mm_pbsa_calceneent.pm line 1137.

can one check why i got this and how to solve it.

Thanks & Regards,
Vani
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Received on Wed Apr 06 2011 - 04:30:03 PDT
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