Dear Amber users,
I need to estimate the free energy of folding of the last 30 residues of a
protein using a 100ns trajectory at equilibrium of the whole protein. I
think MM-PBSA does not allow to compute this** estimate because the terminal
is linked to the rest of the protein. Could anybody point me to other tools
that I could use ?
Jose M. Borreguero
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Received on Tue Apr 05 2011 - 18:00:04 PDT
