[AMBER] positive TdS

From: Hector A. Baldoni <hbaldoni.unsl.edu.ar>
Date: Fri, 1 Apr 2011 13:26:01 -0300 (ARGSL-ST)

Dear Amber users

I am analyzing the chaperone domain I of the 1nlt pdb complex following
the procedure published in J. Chem. Inf. Model. 2011, 51, 69–82. The
final results is in the attached file.
My question is why the TdS is so strong that make the final dG positive.
Does the TdS should or shouldn’t be included in the final dG calculation.
How could I explain for this? Any comments are welcome

Regards,
Hector.

---------------------------------
 Dr. Hector A. Baldoni
 Departamento de Quimica
 Universidad Nacional de San Luis
 Chacabuco 917 (D5700BWS)
 San Luis - Argentina
 hbaldoni at unsl.edu.ar
 Tel.:+54-(0)2652-423789 ext. 157
----------------------------------

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Received on Fri Apr 01 2011 - 11:00:02 PDT
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