Thanks David,
yes, I did a make and make install in the directory and it worked.
So it seems to be working but an error comces up with the makeDIST_RST:
"Error no map function for H2'1 DT5"
Do you know what this means?
Kind regards,
Andre
----- Original Message -----
From: "case" <case.biomaps.rutgers.edu>
To: "AMBER Mailing List" <amber.ambermd.org>
Sent: Wednesday, March 16, 2011 11:51 AM
Subject: Re: [AMBER] Assertion failed: nat < 5000, file makeDIST_RST
On Wed, Mar 16, 2011, Andre Serobian wrote:
>
> I am trying to use makeDIST_RST for a pdb file that has approx. 20,000
> atoms.
>
> The original global.h file has stated the maxatoms as 5000 and after
> changing this number in the file to something like 50,000 I still get
> the same error of:
> "Assertion failed: nat < 5000, file makeDIST_RST"
>
> Are there any other parameters I need to change in the global.h file or
> any other process I need to do which tells the program this number has
> changed?
This is very odd. Are you sure you re-compiled the program, and that you
are running the newly-compiled code? (Please double-check your timestamps
to be sure.) At the very top of the output file there should be a line
"Currently configured for up to xxxx atoms": is that number still 5000?
....dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Tue Mar 15 2011 - 21:30:04 PDT
