Hi all,
I tried to run my simulations on a machine with 2 quad core processors (8 in
total). When i top, it shows 8 running sander.MPI.
But when i open the .out file from md run, it stated that:
"Running AMBER/MPI version on 1 nodes"
and this actually explained why my simulation taken such a long time, even
for 200 ps (about 3 days).
Pls assist and comment. Thanks.
Thanks and regards,
Colvin
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Received on Tue Mar 08 2011 - 01:30:05 PST
