Re: [AMBER] increasing rmsd value

From: Bill Ross <ross.cgl.ucsf.EDU>
Date: Tue, 15 Feb 2011 17:42:35 -0800

> Here is the rms plot for the first 100ps.

I thought you said the _rms_ went to 100. It does seem to be leveling
off at <15, so that might be reasonable, depending on the source of
your starting coordinates. If you describe this, others with more
experience may be able to comment, but to my eye there is nothing
necessarily wrong with the value, and it seems to be converging in
a reasonable way.


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Received on Tue Feb 15 2011 - 18:00:05 PST
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